Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.77□□□□□ -0.36
Trav9n-2A0A0G2JDP3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-2A0A0G2JDP3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9n-2A0A0G2JDP3 Gm11927-201ENSMUST00000118472 759 ntBASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Idnk-204ENSMUST00000226010 1898 ntBASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm12896-201ENSMUST00000118430 226 ntBASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mtag2-201ENSMUST00000058665 714 ntBASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9n-2A0A0G2JDP3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms