Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.93■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.9■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Igkv5-43A0A0B4J1J2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms