Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm2274-201ENSMUST00000184539 609 ntBASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gm18959-201ENSMUST00000208954 655 ntBASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv5-45A0A0B4J1J1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms