Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trbv20A0A0B4J1H5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv20A0A0B4J1H5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm40848-201ENSMUST00000221998 324 ntBASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Trbv20A0A0B4J1H5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm13146-201ENSMUST00000118508 780 ntBASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Dancr-204ENSMUST00000132389 2347 ntBASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv20A0A0B4J1H5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Gm13534-201ENSMUST00000121169 513 ntBASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trbv20A0A0B4J1H5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv20A0A0B4J1H5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv20A0A0B4J1H5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv20A0A0B4J1H5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv20A0A0B4J1H5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trbv20A0A0B4J1H5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.7■□□□□ 0.1
Trbv20A0A0B4J1H5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms