Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv16A0A0B4J1H3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv16A0A0B4J1H3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv16A0A0B4J1H3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv16A0A0B4J1H3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.71□□□□□ -0.38
Trbv16A0A0B4J1H3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trbv16A0A0B4J1H3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm2399-201ENSMUST00000104944 225 ntBASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv16A0A0B4J1H3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.69□□□□□ -0.38
Trbv16A0A0B4J1H3 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms