Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv3A0A0A6YYE2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.53□□□□□ -0.24
Trbv3A0A0A6YYE2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv3A0A0A6YYE2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv3A0A0A6YYE2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv3A0A0A6YYE2 Mir8112-201ENSMUST00000184382 131 ntBASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv3A0A0A6YYE2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv3A0A0A6YYE2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms