Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh7A0A0A6YY83 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm10517-202ENSMUST00000192970 758 ntBASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh7A0A0A6YY83 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh7A0A0A6YY83 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm27011-201ENSMUST00000182352 972 ntBASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh7A0A0A6YY83 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh7A0A0A6YY83 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh7A0A0A6YY83 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms