Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ighv1-42A0A0A6YY38 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 AA414768-201ENSMUST00000121924 1257 ntBASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-42A0A0A6YY38 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm21362-201ENSMUST00000194272 928 ntBASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-42A0A0A6YY38 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm17661-201ENSMUST00000170317 270 ntBASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm7370-201ENSMUST00000219471 767 ntBASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.16■□□□□ 0.18
Ighv1-42A0A0A6YY38 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Mir8112-201ENSMUST00000184382 131 ntBASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms