Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Gm44549-201ENSMUST00000208351 577 ntBASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-9A0A0A6YW37 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Zfp783-201ENSMUST00000095946 670 ntBASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-9A0A0A6YW37 Flg-201ENSMUST00000050758 1488 ntBASIC13.21□□□□□ -0.3
Ighv1-9A0A0A6YW37 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mir5133-201ENSMUST00000174955 77 ntBASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms