Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav21-dv12A0A075B6C4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm13148-201ENSMUST00000118892 745 ntBASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm44549-201ENSMUST00000208351 577 ntBASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav21-dv12A0A075B6C4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Gm5408-201ENSMUST00000197998 747 ntBASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Rab3c-203ENSMUST00000224180 967 ntBASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav21-dv12A0A075B6C4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav21-dv12A0A075B6C4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms