Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Gm15378-201ENSMUST00000121894 207 ntBASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-4A0A075B6B4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Gm11643-201ENSMUST00000119578 864 ntBASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-4A0A075B6B4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-4A0A075B6B4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Gm42545-201ENSMUST00000202755 922 ntBASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-4A0A075B6B4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms