Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav6d-7A0A075B6B0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6d-7A0A075B6B0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Rab3c-203ENSMUST00000224180 967 ntBASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6d-7A0A075B6B0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6d-7A0A075B6B0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-7A0A075B6B0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms