Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.37□□□□□ -0.11
Trav18A0A075B656 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav18A0A075B656 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav18A0A075B656 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.36□□□□□ -0.11
Trav18A0A075B656 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav18A0A075B656 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Gm29791-202ENSMUST00000207888 369 ntBASIC14.35□□□□□ -0.11
Trav18A0A075B656 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.35□□□□□ -0.11
Trav18A0A075B656 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav18A0A075B656 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Gm44549-201ENSMUST00000208351 577 ntBASIC14.34□□□□□ -0.11
Trav18A0A075B656 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.34□□□□□ -0.11
Trav18A0A075B656 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Zfp783-201ENSMUST00000095946 670 ntBASIC14.34□□□□□ -0.11
Trav18A0A075B656 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms