Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav12-3A0A075B648 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-3A0A075B648 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Gm10420-201ENSMUST00000121713 882 ntBASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-3A0A075B648 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-3A0A075B648 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms