Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Gm13216-201ENSMUST00000117145 591 ntBASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Gm38205-201ENSMUST00000192243 258 ntBASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav14n-3A0A075B645 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Gm12251-201ENSMUST00000117893 792 ntBASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Smad6-203ENSMUST00000179458 273 ntBASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Trav14n-3A0A075B645 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav14n-3A0A075B645 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav14n-3A0A075B645 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms