Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-6A0A075B603 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-6A0A075B603 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Trav6-6A0A075B603 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-6A0A075B603 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Gm13146-201ENSMUST00000118508 780 ntBASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-6A0A075B603 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Reep4-203ENSMUST00000226563 1444 ntBASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-6A0A075B603 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Gm13234-201ENSMUST00000120010 747 ntBASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms