Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Gm2399-201ENSMUST00000104944 225 ntBASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Gm8969-201ENSMUST00000199694 526 ntBASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Gm8495-201ENSMUST00000188740 694 ntBASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9-1A0A075B601 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Gm13148-201ENSMUST00000118892 745 ntBASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-1A0A075B601 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-1A0A075B601 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms