Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Smc1aQ9CU62 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Smc1aQ9CU62 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Smc1aQ9CU62 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm22493-201ENSMUST00000104494 132 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm11673-201ENSMUST00000117846 331 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm14933-201ENSMUST00000118840 481 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm13932-201ENSMUST00000120873 610 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm23501-201ENSMUST00000157744 256 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Mir6960-201ENSMUST00000183449 61 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm38080-201ENSMUST00000194035 268 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm36954-201ENSMUST00000195362 363 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm43144-201ENSMUST00000198256 485 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm17951-201ENSMUST00000198536 496 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm43005-201ENSMUST00000199015 648 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm45007-201ENSMUST00000206237 366 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm8556-201ENSMUST00000210437 664 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Mir346-201ENSMUST00000083547 98 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Smc1aQ9CU62 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm15752-201ENSMUST00000117427 394 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm15361-201ENSMUST00000119320 444 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm25923-201ENSMUST00000158312 138 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm15795-201ENSMUST00000160969 553 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm3084-201ENSMUST00000169967 598 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm8703-201ENSMUST00000203793 730 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm18487-201ENSMUST00000215826 878 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Mecom-201ENSMUST00000061088 348 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm8724-201ENSMUST00000081668 483 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm24166-201ENSMUST00000082724 135 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Smc1aQ9CU62 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm10552-201ENSMUST00000113396 372 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm11483-201ENSMUST00000119839 247 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm16259-201ENSMUST00000145241 553 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Snora81-201ENSMUST00000157310 178 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm24664-201ENSMUST00000158939 100 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms