Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm27254-201ENSMUST00000183926 517 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm27409-201ENSMUST00000184727 80 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm2914-201ENSMUST00000186120 328 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm21191-201ENSMUST00000186484 930 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm28830-201ENSMUST00000188192 213 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm29503-201ENSMUST00000191044 930 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm31123-201ENSMUST00000192094 666 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm37111-201ENSMUST00000193250 634 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm37187-201ENSMUST00000193425 341 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Mir409-201ENSMUST00000198153 79 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm4321-201ENSMUST00000200520 442 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 AC157654.1-201ENSMUST00000224130 820 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm6776-201ENSMUST00000057752 900 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm23058-201ENSMUST00000093703 107 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc9Q8VC31 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Scarna13-201ENSMUST00000158164 275 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm28356-202ENSMUST00000187566 858 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm6680-201ENSMUST00000192789 950 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm44138-201ENSMUST00000204939 271 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm44603-201ENSMUST00000206820 367 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm46192-201ENSMUST00000217894 326 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm2645-201ENSMUST00000223516 547 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm7421-201ENSMUST00000119298 639 ntBASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm7365-201ENSMUST00000120877 639 ntBASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm36964-201ENSMUST00000191876 198 ntBASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc9Q8VC31 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms