Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm13366-201ENSMUST00000122198 970 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm28191-201ENSMUST00000189112 211 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm37319-201ENSMUST00000193500 636 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm42999-201ENSMUST00000198049 786 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm36382-201ENSMUST00000198892 541 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm5649-201ENSMUST00000217918 951 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm4263-202ENSMUST00000221392 667 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm7045-201ENSMUST00000221466 605 ntBASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf39Q8K2Z2 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm26376-201ENSMUST00000104784 110 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm15206-201ENSMUST00000119143 454 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm11719-201ENSMUST00000119399 351 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm14303-201ENSMUST00000121320 171 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm13220-201ENSMUST00000121535 508 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm13745-201ENSMUST00000121994 527 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm16134-201ENSMUST00000161714 336 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm38150-201ENSMUST00000192996 452 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm44038-201ENSMUST00000203952 889 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Prpf39Q8K2Z2 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm11350-201ENSMUST00000121436 870 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm5392-201ENSMUST00000122189 789 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Mir3062-201ENSMUST00000174986 105 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm22177-201ENSMUST00000175002 158 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm25525-201ENSMUST00000177701 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm26178-201ENSMUST00000177706 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm26465-201ENSMUST00000178517 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm24317-201ENSMUST00000178536 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm22243-201ENSMUST00000178754 120 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm25021-201ENSMUST00000179184 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm22995-201ENSMUST00000179670 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm24424-201ENSMUST00000179714 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm24389-201ENSMUST00000179962 107 ntBASIC4.69□□□□□ -1.66
Prpf39Q8K2Z2 Gm25672-201ENSMUST00000180111 107 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms