Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm24117-201ENSMUST00000103973 133 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm14365-201ENSMUST00000117535 587 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13489-201ENSMUST00000121234 971 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm3091-201ENSMUST00000163408 484 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Mir5103-201ENSMUST00000175111 79 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm28503-201ENSMUST00000185966 147 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm21856-201ENSMUST00000187547 696 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm21735-201ENSMUST00000190360 696 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43825-201ENSMUST00000199650 734 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm44330-201ENSMUST00000200106 143 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13170-201ENSMUST00000119716 643 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm14725-201ENSMUST00000120324 828 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13430-201ENSMUST00000121366 288 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm25106-201ENSMUST00000122672 134 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm23171-201ENSMUST00000157159 264 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26310-201ENSMUST00000157766 117 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm16303-201ENSMUST00000161498 390 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm3191-201ENSMUST00000167139 346 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm29610-201ENSMUST00000187749 453 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm17887-201ENSMUST00000200194 547 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm18377-201ENSMUST00000215141 607 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc28aQ8CEI3 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26367-201ENSMUST00000104165 132 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm25806-201ENSMUST00000122782 122 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Zakit-201ENSMUST00000157677 308 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm15796-201ENSMUST00000162135 204 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm27690-201ENSMUST00000184596 126 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms