Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm25019-201ENSMUST00000179732 110 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Mir6537-201ENSMUST00000184150 110 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm19503-201ENSMUST00000187109 241 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm5252-201ENSMUST00000189030 909 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm37501-201ENSMUST00000192830 691 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm17887-201ENSMUST00000200194 547 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm45247-201ENSMUST00000210757 309 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm45789-201ENSMUST00000213038 364 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Atg4aQ8C9S8 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm24469-201ENSMUST00000104487 131 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm11433-201ENSMUST00000118318 228 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm12988-201ENSMUST00000119054 478 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm12340-201ENSMUST00000121617 462 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm4487-201ENSMUST00000150617 442 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm8641-201ENSMUST00000186995 826 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm28190-201ENSMUST00000189766 722 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm38268-201ENSMUST00000195813 193 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm42593-201ENSMUST00000198469 377 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm43717-201ENSMUST00000198684 310 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm2691-201ENSMUST00000203205 901 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm46138-201ENSMUST00000215294 426 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Atg4aQ8C9S8 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm22657-201ENSMUST00000104197 132 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm23226-201ENSMUST00000116927 103 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm12317-201ENSMUST00000122307 319 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm15274-201ENSMUST00000131442 291 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm21979-201ENSMUST00000139887 291 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm15259-201ENSMUST00000151262 291 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm25965-201ENSMUST00000157170 93 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Mir1947-201ENSMUST00000158235 85 ntBASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Atg4aQ8C9S8 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms