Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm23319-201ENSMUST00000104467 131 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm3160-201ENSMUST00000128343 607 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm37164-201ENSMUST00000192809 637 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm24376-201ENSMUST00000104399 127 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm20657-201ENSMUST00000177079 515 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm7946-201ENSMUST00000203326 958 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm45070-201ENSMUST00000208100 246 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm17829-201ENSMUST00000219782 344 ntBASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Col6a6Q8C6K9 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm8989-201ENSMUST00000184782 7275 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm6214-201ENSMUST00000178845 541 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm27190-201ENSMUST00000184890 542 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm36964-201ENSMUST00000191876 198 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm8939-201ENSMUST00000192577 964 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm9309-201ENSMUST00000223537 546 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col6a6Q8C6K9 Gm11212-201ENSMUST00000118337 618 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm8745-201ENSMUST00000207846 782 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm23746-201ENSMUST00000104229 125 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm23499-201ENSMUST00000157736 268 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm24850-201ENSMUST00000158029 119 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm16378-201ENSMUST00000179168 342 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Mir7669-201ENSMUST00000183442 58 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm38098-201ENSMUST00000194115 241 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.7□□□□□ -1.82
Col6a6Q8C6K9 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC3.69□□□□□ -1.82
Col6a6Q8C6K9 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms