Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22775-201ENSMUST00000177630 120 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm23569-201ENSMUST00000180120 120 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm23148-201ENSMUST00000180367 107 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm43471-201ENSMUST00000197550 467 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 AC157476.1-201ENSMUST00000215555 169 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm24449-201ENSMUST00000083985 106 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim35Q8C006 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.67□□□□□ -1.18
Trim35Q8C006 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim35Q8C006 Gm3584-201ENSMUST00000173822 2565 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm44144-201ENSMUST00000203683 1960 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm15148-201ENSMUST00000117602 156 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm13252-201ENSMUST00000119355 321 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm15192-201ENSMUST00000121005 293 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm5135-201ENSMUST00000121100 573 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm23533-201ENSMUST00000157540 245 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm23164-201ENSMUST00000175084 111 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm24487-201ENSMUST00000178017 63 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm26269-201ENSMUST00000180144 126 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Mir7029-201ENSMUST00000184777 61 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Mir195b-201ENSMUST00000184814 97 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 CT956049.1-201ENSMUST00000225671 763 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim35Q8C006 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm9801-201ENSMUST00000054860 408 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim35Q8C006 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Trim35Q8C006 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm25167-201ENSMUST00000104188 120 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm15572-201ENSMUST00000119248 593 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm14656-201ENSMUST00000120342 502 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm6446-201ENSMUST00000120604 818 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm13649-201ENSMUST00000122325 606 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms