Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm18482-201ENSMUST00000202405 760 ntBASIC3.59□□□□□ -1.84
Ttc28Q80XJ3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Ttc28Q80XJ3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Ttc28Q80XJ3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm37628-201ENSMUST00000194644 5440 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm38105-201ENSMUST00000192112 2621 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm26019-201ENSMUST00000104407 119 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm24068-201ENSMUST00000104513 132 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29320-201ENSMUST00000185235 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29179-202ENSMUST00000186138 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm28598-201ENSMUST00000186490 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29448-201ENSMUST00000186675 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29314-201ENSMUST00000186800 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm28253-202ENSMUST00000187971 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29268-201ENSMUST00000188669 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm29169-201ENSMUST00000189835 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm28978-201ENSMUST00000191120 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm37172-201ENSMUST00000191926 615 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm8724-201ENSMUST00000081668 483 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm14991-201ENSMUST00000119913 598 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm26148-201ENSMUST00000157430 68 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm6214-201ENSMUST00000178845 541 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm37603-201ENSMUST00000192368 219 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm44118-201ENSMUST00000204665 229 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.58□□□□□ -1.84
Ttc28Q80XJ3 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm11393-201ENSMUST00000118019 288 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm5244-202ENSMUST00000189517 743 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm37601-201ENSMUST00000194922 394 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm18429-201ENSMUST00000198707 421 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm18011-201ENSMUST00000203717 565 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm44513-201ENSMUST00000206811 439 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 AC113031.3-201ENSMUST00000226552 190 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm23518-201ENSMUST00000082835 153 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm43317-201ENSMUST00000197924 2544 ntBASIC3.57□□□□□ -1.84
Ttc28Q80XJ3 Gm22890-201ENSMUST00000158642 144 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm8748-201ENSMUST00000211125 587 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm18377-201ENSMUST00000215141 607 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 AC123944.2-201ENSMUST00000215290 382 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm25765-201ENSMUST00000104100 132 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm15018-201ENSMUST00000117090 633 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm7834-201ENSMUST00000117560 437 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm24477-201ENSMUST00000157438 103 ntBASIC3.56□□□□□ -1.84
Ttc28Q80XJ3 Gm24850-201ENSMUST00000158029 119 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms