Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Mir700-201ENSMUST00000102169 79 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm26067-201ENSMUST00000103789 110 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14987-201ENSMUST00000117820 676 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14563-201ENSMUST00000120571 354 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm7931-201ENSMUST00000121537 271 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm15840-201ENSMUST00000122099 943 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23050-201ENSMUST00000158775 165 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm26057-201ENSMUST00000178099 165 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43976-201ENSMUST00000203637 235 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44687-201ENSMUST00000204975 235 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9278-201ENSMUST00000205508 553 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45724-201ENSMUST00000213031 420 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm10095-201ENSMUST00000222765 483 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23404-201ENSMUST00000082543 97 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23093-201ENSMUST00000083450 102 ntBASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sh3rf1Q69ZI1 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13311-201ENSMUST00000117863 379 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13641-201ENSMUST00000117993 473 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Mir3097-201ENSMUST00000175356 67 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm20701-201ENSMUST00000176082 347 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm20794-201ENSMUST00000177626 628 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25874-201ENSMUST00000178030 79 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Mir7008-201ENSMUST00000184398 63 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5734-201ENSMUST00000189787 913 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm37358-201ENSMUST00000195492 479 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm29736-201ENSMUST00000198189 385 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43105-201ENSMUST00000202987 459 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5886-202ENSMUST00000203957 522 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5322-201ENSMUST00000206142 699 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45375-201ENSMUST00000210338 280 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45750-201ENSMUST00000211966 354 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms