Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim28Q62318 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC122382.2-201ENSMUST00000225128 3602 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm37916-201ENSMUST00000192153 2435 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm23709-201ENSMUST00000104364 130 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Mir879-201ENSMUST00000104703 76 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm14575-201ENSMUST00000117210 560 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm12587-201ENSMUST00000120180 427 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm15166-201ENSMUST00000120790 385 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm4852-201ENSMUST00000121202 729 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm12332-201ENSMUST00000121397 922 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm23465-201ENSMUST00000157134 262 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm26000-201ENSMUST00000157991 107 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm22726-201ENSMUST00000158089 179 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm28594-201ENSMUST00000187022 661 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm29492-201ENSMUST00000187124 457 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm38061-201ENSMUST00000192490 365 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm43232-201ENSMUST00000201346 364 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm44865-201ENSMUST00000207240 531 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Gm18585-201ENSMUST00000215197 556 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm18442-201ENSMUST00000220925 639 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Trim28Q62318 AC125523.1-201ENSMUST00000228018 934 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim28Q62318 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm6369-201ENSMUST00000069626 412 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim28Q62318 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim28Q62318 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.18□□□□□ -1.42
Trim28Q62318 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim28Q62318 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm42704-201ENSMUST00000196875 1778 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 Snord65-201ENSMUST00000104269 72 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm22498-201ENSMUST00000104497 86 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm16082-201ENSMUST00000115992 377 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm15361-201ENSMUST00000119320 444 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm13902-201ENSMUST00000120168 605 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm25713-201ENSMUST00000158625 109 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm9294-201ENSMUST00000165198 789 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm24754-201ENSMUST00000177997 107 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Zfp950-206ENSMUST00000178819 171 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm27864-201ENSMUST00000183704 190 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm27163-201ENSMUST00000184767 409 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm3145-201ENSMUST00000188584 220 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm37878-201ENSMUST00000192108 387 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm43431-201ENSMUST00000198577 340 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Gm5284-201ENSMUST00000199053 903 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms