Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm43872-201ENSMUST00000203218 2213 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm29097-201ENSMUST00000190273 422 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm15553-201ENSMUST00000118757 430 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm12638-201ENSMUST00000119531 298 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44543-201ENSMUST00000209136 396 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm23443-201ENSMUST00000082916 128 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.9□□□□□ -1.62
Ccdc88aQ5SNZ0 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm7834-201ENSMUST00000117560 437 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm15166-201ENSMUST00000120790 385 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm28660-201ENSMUST00000186496 253 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm21803-201ENSMUST00000188897 693 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm43304-201ENSMUST00000196803 326 ntBASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm12683-201ENSMUST00000117528 415 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm15426-201ENSMUST00000117823 556 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm10059-201ENSMUST00000131139 171 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm22156-201ENSMUST00000158409 141 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm19503-201ENSMUST00000187109 241 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm7380-201ENSMUST00000211599 466 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Mir202-201ENSMUST00000083568 72 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88aQ5SNZ0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm13438-201ENSMUST00000120100 573 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm27899-201ENSMUST00000184715 64 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm27457-201ENSMUST00000184771 156 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm42566-201ENSMUST00000197120 643 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm19243-201ENSMUST00000198592 269 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm44032-201ENSMUST00000204841 166 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm23133-201ENSMUST00000104255 135 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm15151-201ENSMUST00000117106 177 ntBASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88aQ5SNZ0 Gm11212-201ENSMUST00000118337 618 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms