Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm27543-201ENSMUST00000183562 177 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Mir7687-201ENSMUST00000184722 59 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm43467-201ENSMUST00000197441 437 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm35648-201ENSMUST00000202304 475 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm45402-201ENSMUST00000211796 223 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm46234-201ENSMUST00000218702 259 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm18413-201ENSMUST00000221573 655 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 CT010506.2-201ENSMUST00000225618 183 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm42549-201ENSMUST00000202392 7004 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm43745-201ENSMUST00000198085 1883 ntBASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim41Q5NCC3 Gm11516-201ENSMUST00000118450 1582 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm24125-201ENSMUST00000104105 137 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm11936-201ENSMUST00000118323 160 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm13488-201ENSMUST00000120419 179 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm24359-201ENSMUST00000158418 221 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm29111-201ENSMUST00000188823 696 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm28584-201ENSMUST00000191489 696 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm38138-201ENSMUST00000193274 696 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm43554-201ENSMUST00000199987 186 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm42930-201ENSMUST00000200872 3260 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Gm37621-201ENSMUST00000194716 5531 ntBASIC10.56□□□□□ -0.72
Trim41Q5NCC3 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm37250-201ENSMUST00000194919 2388 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm13866-201ENSMUST00000118901 968 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm11719-201ENSMUST00000119399 351 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm13804-201ENSMUST00000119552 172 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm13356-201ENSMUST00000121678 335 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Snora81-201ENSMUST00000157310 178 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm22789-201ENSMUST00000157884 130 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm23280-201ENSMUST00000157905 139 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm23224-201ENSMUST00000158122 271 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm24303-201ENSMUST00000178237 126 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm37774-201ENSMUST00000194401 245 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm44858-201ENSMUST00000207360 154 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm45409-201ENSMUST00000211486 252 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 CR974429.1-201ENSMUST00000220877 827 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm23627-201ENSMUST00000082459 107 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm22502-201ENSMUST00000082488 107 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm24149-201ENSMUST00000082757 107 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm24316-201ENSMUST00000083041 107 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm18853-201ENSMUST00000183629 3596 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Malat1-201ENSMUST00000172812 6983 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm11284-201ENSMUST00000121910 1887 ntBASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim41Q5NCC3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms