Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm24608-201ENSMUST00000104381 136 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Mir105-201ENSMUST00000104655 80 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm15933-201ENSMUST00000117215 616 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm15161-201ENSMUST00000117340 387 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm7834-201ENSMUST00000117560 437 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm13887-201ENSMUST00000119009 344 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm14586-201ENSMUST00000119571 408 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Snora81-201ENSMUST00000157310 178 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm3025-201ENSMUST00000163454 489 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm3077-201ENSMUST00000165903 627 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm2878-201ENSMUST00000170173 486 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm18522-201ENSMUST00000173947 650 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Mir6344-201ENSMUST00000183462 104 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28769-201ENSMUST00000190176 615 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm37601-201ENSMUST00000194922 394 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm45660-201ENSMUST00000210267 151 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm3690-201ENSMUST00000211341 262 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm6474-201ENSMUST00000223250 699 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Diaph3-206ENSMUST00000226745 713 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm23102-201ENSMUST00000083724 116 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.23□□□□□ -1.73
Trim40Q3UWA4 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm23942-201ENSMUST00000101956 107 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm12901-201ENSMUST00000118690 532 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm4732-201ENSMUST00000118778 473 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm15603-201ENSMUST00000119252 492 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm12313-201ENSMUST00000121347 421 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm14589-201ENSMUST00000121640 727 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm12650-201ENSMUST00000121966 258 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm6214-201ENSMUST00000178845 541 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29320-201ENSMUST00000185235 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29179-202ENSMUST00000186138 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29448-201ENSMUST00000186675 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29314-201ENSMUST00000186800 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm28253-202ENSMUST00000187971 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm29169-201ENSMUST00000189835 615 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm28467-201ENSMUST00000190981 318 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm43586-201ENSMUST00000195948 310 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm8069-201ENSMUST00000197887 154 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms