Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm11866-201ENSMUST00000120209 335 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm16179-201ENSMUST00000120685 373 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm43774-201ENSMUST00000196327 878 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm42830-201ENSMUST00000196642 313 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm44023-201ENSMUST00000203710 469 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm46138-201ENSMUST00000215294 426 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Upf3bQ3ULL6 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm15361-201ENSMUST00000119320 444 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm2182-201ENSMUST00000145243 663 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm27286-201ENSMUST00000184934 179 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm28871-201ENSMUST00000186191 687 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm6802-202ENSMUST00000186566 126 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm18183-201ENSMUST00000191024 615 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm37088-201ENSMUST00000193887 406 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm42814-201ENSMUST00000199370 460 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm44765-201ENSMUST00000206927 601 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Gm8724-201ENSMUST00000081668 483 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.57□□□□□ -1.68
Upf3bQ3ULL6 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm10552-201ENSMUST00000113396 372 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm9427-201ENSMUST00000116187 651 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm13333-201ENSMUST00000119424 781 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm14716-201ENSMUST00000120138 718 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm4852-201ENSMUST00000121202 729 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm3757-201ENSMUST00000125878 675 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm3191-201ENSMUST00000167139 346 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm22857-201ENSMUST00000174969 134 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm5252-201ENSMUST00000189030 909 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms