Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.66□□□□□ -1.5
Sox9Q04887 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox9Q04887 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox9Q04887 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Sox9Q04887 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox9Q04887 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm25418-201ENSMUST00000104214 129 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm23839-201ENSMUST00000116957 109 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox9Q04887 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm12102-201ENSMUST00000118251 604 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm23824-201ENSMUST00000158741 276 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm7316-201ENSMUST00000165395 445 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox9Q04887 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm6900-201ENSMUST00000178971 342 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm4322-201ENSMUST00000191094 336 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm8774-201ENSMUST00000203621 692 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox9Q04887 Gm45409-201ENSMUST00000211486 252 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Gm17915-201ENSMUST00000222077 548 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox9Q04887 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.65□□□□□ -1.5
Sox9Q04887 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox9Q04887 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox9Q04887 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sox9Q04887 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox9Q04887 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox9Q04887 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sox9Q04887 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.65□□□□□ -1.51
Sox9Q04887 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox9Q04887 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.65□□□□□ -1.51
Sox9Q04887 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox9Q04887 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sox9Q04887 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm6893-201ENSMUST00000118385 522 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm6664-201ENSMUST00000119138 468 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm13603-201ENSMUST00000119404 83 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm24875-201ENSMUST00000158888 104 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm21809-201ENSMUST00000178495 468 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm17412-201ENSMUST00000179261 468 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm28594-201ENSMUST00000187022 661 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm20056-201ENSMUST00000194813 519 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm6261-201ENSMUST00000204707 760 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm7530-201ENSMUST00000218466 605 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms