Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm22710-201ENSMUST00000116892 125 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm14897-201ENSMUST00000118213 207 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm23233-201ENSMUST00000157301 137 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm23774-201ENSMUST00000158990 131 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm42805-201ENSMUST00000196158 276 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm29778-201ENSMUST00000201667 466 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm7753-201ENSMUST00000221007 867 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm22810-201ENSMUST00000082741 158 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 n-R5s180-201ENSMUST00000082770 106 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm43496-201ENSMUST00000201682 3001 ntBASIC4.95□□□□□ -1.62
Col8a1Q00780 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col8a1Q00780 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC4.95□□□□□ -1.62
Col8a1Q00780 Gm8141-201ENSMUST00000190856 1723 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm37897-201ENSMUST00000192613 3561 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3940-201ENSMUST00000105087 432 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm13379-201ENSMUST00000118053 621 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm12040-201ENSMUST00000118357 537 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm14793-201ENSMUST00000118739 311 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm23537-201ENSMUST00000157536 330 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm25902-201ENSMUST00000158493 318 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Mir6481-201ENSMUST00000184617 110 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Mir7087-201ENSMUST00000184840 70 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm27286-201ENSMUST00000184934 179 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28604-201ENSMUST00000186629 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28566-201ENSMUST00000186714 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms