Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PrkdcP97313 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC2.84□□□□□ -1.96
PrkdcP97313 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PrkdcP97313 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm16332-201ENSMUST00000134229 2967 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm11761-201ENSMUST00000121392 445 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm28358-202ENSMUST00000189292 223 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm45379-201ENSMUST00000211772 549 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 AC155805.1-201ENSMUST00000222419 3808 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm37412-201ENSMUST00000194866 4321 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm23609-201ENSMUST00000104542 127 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm22314-201ENSMUST00000158007 281 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 CT025535.2-201ENSMUST00000228572 7441 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm14575-201ENSMUST00000117210 560 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Gm11408-201ENSMUST00000117889 519 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm29097-201ENSMUST00000190273 422 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Gm32447-201ENSMUST00000194265 697 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm45061-201ENSMUST00000204395 2095 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm22480-201ENSMUST00000122568 128 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.83□□□□□ -1.96
PrkdcP97313 Gm18194-201ENSMUST00000210455 481 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 AC152062.1-201ENSMUST00000218129 386 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Gm10161-201ENSMUST00000091506 204 ntBASIC2.83□□□□□ -1.96
PrkdcP97313 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm43389-201ENSMUST00000196080 2595 ntBASIC2.82□□□□□ -1.96
PrkdcP97313 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm10933-201ENSMUST00000221891 1861 ntBASIC2.82□□□□□ -1.96
PrkdcP97313 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm28396-201ENSMUST00000190309 379 ntBASIC2.82□□□□□ -1.96
PrkdcP97313 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PrkdcP97313 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PrkdcP97313 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
PrkdcP97313 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm15466-201ENSMUST00000122299 333 ntBASIC2.82□□□□□ -1.96
PrkdcP97313 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC2.82□□□□□ -1.96
PrkdcP97313 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC2.82□□□□□ -1.96
PrkdcP97313 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PrkdcP97313 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms