Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.82□□□□□ -1.48
Hmgb1P63158 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Hmgb1P63158 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Hmgb1P63158 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Hmgb1P63158 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb1P63158 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb1P63158 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.82□□□□□ -1.48
Hmgb1P63158 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.82□□□□□ -1.48
Hmgb1P63158 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.82□□□□□ -1.48
Hmgb1P63158 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb1P63158 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm15233-201ENSMUST00000118747 400 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm6591-201ENSMUST00000121063 434 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm23167-201ENSMUST00000157155 103 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm23662-201ENSMUST00000158046 111 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm6650-201ENSMUST00000166710 614 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm7346-201ENSMUST00000169661 476 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm27024-201ENSMUST00000182561 755 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Mir6989-201ENSMUST00000184812 65 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm28353-201ENSMUST00000186482 570 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm28533-201ENSMUST00000186741 570 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm28847-201ENSMUST00000186778 700 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm29365-201ENSMUST00000189461 699 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm28500-201ENSMUST00000190286 151 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm37492-201ENSMUST00000191948 376 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm43142-201ENSMUST00000198670 361 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm43975-201ENSMUST00000203023 481 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm4510-201ENSMUST00000218265 427 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC131743.3-201ENSMUST00000222099 662 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC117797.2-201ENSMUST00000224419 531 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 AC121114.1-201ENSMUST00000228522 570 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Snord21-201ENSMUST00000082519 94 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Mir298-201ENSMUST00000083476 82 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb1P63158 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb1P63158 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb1P63158 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Hmgb1P63158 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Hmgb1P63158 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm22266-201ENSMUST00000104011 138 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hmgb1P63158 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm22186-201ENSMUST00000157822 122 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm26489-201ENSMUST00000157880 264 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm17109-201ENSMUST00000163985 358 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm17030-201ENSMUST00000167016 393 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm27342-201ENSMUST00000183530 109 ntBASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hmgb1P63158 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms