Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm29556-201ENSMUST00000187591 696 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm37658-201ENSMUST00000192672 315 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm42828-201ENSMUST00000199669 469 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm7181-201ENSMUST00000202197 434 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm3148-201ENSMUST00000203594 612 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm23939-201ENSMUST00000082880 133 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sf3b6P59708 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sf3b6P59708 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Sf3b6P59708 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm11369-201ENSMUST00000120812 318 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm11829-201ENSMUST00000121003 282 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm25966-201ENSMUST00000157169 117 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm25219-201ENSMUST00000157545 330 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm22160-201ENSMUST00000158405 328 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm22428-201ENSMUST00000158554 132 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm26468-201ENSMUST00000158644 106 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm17048-201ENSMUST00000179266 847 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm4322-201ENSMUST00000191094 336 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm38050-201ENSMUST00000191904 238 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm38046-201ENSMUST00000192733 550 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm18805-201ENSMUST00000206872 655 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm29785-201ENSMUST00000217033 383 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.23□□□□□ -1.57
Sf3b6P59708 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Gm8231-201ENSMUST00000221617 783 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.23□□□□□ -1.57
Sf3b6P59708 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sf3b6P59708 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sf3b6P59708 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms