Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox1P53783 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Sox1P53783 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Gm24265-201ENSMUST00000101833 141 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Mir759-201ENSMUST00000103254 98 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm14987-201ENSMUST00000117820 676 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm12328-201ENSMUST00000118611 197 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm11890-201ENSMUST00000119585 417 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm11498-201ENSMUST00000120660 949 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm12007-201ENSMUST00000120978 597 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm11677-201ENSMUST00000121349 977 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm15428-201ENSMUST00000121352 333 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm13220-201ENSMUST00000121535 508 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm14679-201ENSMUST00000121536 722 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm12267-201ENSMUST00000121609 761 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm22519-201ENSMUST00000158270 178 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm22122-201ENSMUST00000175147 200 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm24757-201ENSMUST00000176987 371 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm24407-201ENSMUST00000177864 141 ntBASIC6.01□□□□□ -1.45
Sox1P53783 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm29105-201ENSMUST00000187256 450 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm7751-201ENSMUST00000212868 709 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm18487-201ENSMUST00000215826 878 ntBASIC6.01□□□□□ -1.45
Sox1P53783 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.01□□□□□ -1.45
Sox1P53783 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.01□□□□□ -1.45
Sox1P53783 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sox1P53783 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox1P53783 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox1P53783 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.01□□□□□ -1.45
Sox1P53783 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Gm14163-201ENSMUST00000117342 217 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6□□□□□ -1.45
Sox1P53783 Gm9006-201ENSMUST00000165520 841 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm22242-201ENSMUST00000175224 118 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm21816-201ENSMUST00000179255 360 ntBASIC6□□□□□ -1.45
Sox1P53783 Mir6410-201ENSMUST00000184204 104 ntBASIC6□□□□□ -1.45
Sox1P53783 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6□□□□□ -1.45
Sox1P53783 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm29111-201ENSMUST00000188823 696 ntBASIC6□□□□□ -1.45
Sox1P53783 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Gm29160-201ENSMUST00000190094 699 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm28584-201ENSMUST00000191489 696 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm38138-201ENSMUST00000193274 696 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6□□□□□ -1.45
Sox1P53783 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6□□□□□ -1.45
Sox1P53783 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
Sox1P53783 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6□□□□□ -1.45
Sox1P53783 AC152946.2-201ENSMUST00000219071 337 ntBASIC6□□□□□ -1.45
Sox1P53783 AC161758.1-201ENSMUST00000226123 310 ntBASIC6□□□□□ -1.45
Sox1P53783 AC158955.1-201ENSMUST00000227140 385 ntBASIC6□□□□□ -1.45
Sox1P53783 Mir129-1-201ENSMUST00000083535 73 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm37347-201ENSMUST00000193969 3071 ntBASIC6□□□□□ -1.45
Sox1P53783 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox1P53783 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox1P53783 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox1P53783 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
Sox1P53783 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6□□□□□ -1.45
Sox1P53783 Gm43031-201ENSMUST00000198500 1887 ntBASIC6□□□□□ -1.45
Sox1P53783 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms