Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm26064-201ENSMUST00000083381 109 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm23875-201ENSMUST00000083711 318 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sdc1P18828 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Sdc1P18828 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm23424-201ENSMUST00000103889 110 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm11408-201ENSMUST00000117889 519 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm5754-201ENSMUST00000118774 892 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm14938-201ENSMUST00000119482 943 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm14776-201ENSMUST00000121029 887 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm12936-201ENSMUST00000121439 301 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm23662-201ENSMUST00000158046 111 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm17142-201ENSMUST00000164933 645 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm22655-201ENSMUST00000174949 96 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm5558-201ENSMUST00000178933 495 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm27025-201ENSMUST00000182392 942 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Mir6344-201ENSMUST00000183462 104 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm27210-201ENSMUST00000184263 402 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm27653-201ENSMUST00000185037 136 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm21856-201ENSMUST00000187547 696 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm2040-201ENSMUST00000202979 289 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm4263-202ENSMUST00000221392 667 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sdc1P18828 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm25810-201ENSMUST00000082752 108 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sdc1P18828 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm6043-201ENSMUST00000099961 492 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.6□□□□□ -1.83
Sdc1P18828 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdc1P18828 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdc1P18828 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sdc1P18828 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm25418-201ENSMUST00000104214 129 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm22592-201ENSMUST00000104242 131 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Sdc1P18828 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm14541-201ENSMUST00000118985 157 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm14875-201ENSMUST00000120881 319 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm14125-202ENSMUST00000120921 756 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm14500-201ENSMUST00000121647 113 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.59□□□□□ -1.83
Sdc1P18828 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm22885-201ENSMUST00000157410 107 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms