Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC3.82□□□□□ -1.8
Cdx1P18111 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm44074-201ENSMUST00000204562 337 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 AC161114.1-201ENSMUST00000218223 474 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 AC121978.1-201ENSMUST00000228357 380 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cdx1P18111 Snord15b-201ENSMUST00000083032 145 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cdx1P18111 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
Cdx1P18111 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cdx1P18111 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.82□□□□□ -1.8
Cdx1P18111 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm3675-201ENSMUST00000175904 1653 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm23063-201ENSMUST00000102350 93 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm22778-201ENSMUST00000104090 128 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm24350-201ENSMUST00000104163 133 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm23593-201ENSMUST00000104309 120 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Cdx1P18111 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm11912-201ENSMUST00000117235 264 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm12577-201ENSMUST00000119701 574 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm15480-201ENSMUST00000120442 519 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm25179-201ENSMUST00000122632 128 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm5258-201ENSMUST00000165437 327 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm9499-201ENSMUST00000180888 964 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm37445-201ENSMUST00000195318 242 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr151-202ENSMUST00000221099 929 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 AC154576.2-203ENSMUST00000224736 253 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Mir20a-201ENSMUST00000083508 107 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Cdx1P18111 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.81□□□□□ -1.8
Cdx1P18111 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdx1P18111 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm23879-201ENSMUST00000116874 126 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm4596-201ENSMUST00000117197 442 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm14067-201ENSMUST00000119340 314 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm5384-201ENSMUST00000120313 463 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm17014-201ENSMUST00000120765 168 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm5353-201ENSMUST00000139800 793 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm16490-201ENSMUST00000165299 351 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Mir6963-201ENSMUST00000183535 71 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm27315-201ENSMUST00000183977 154 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Mir6926-201ENSMUST00000184562 68 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm28655-201ENSMUST00000191538 692 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm36983-201ENSMUST00000192280 1102 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm18717-201ENSMUST00000192744 1241 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms