Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm36527-201ENSMUST00000195500 3029 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.2□□□□□ -1.58
Hoxd3P09027 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.2□□□□□ -1.58
Hoxd3P09027 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm23979-201ENSMUST00000104071 128 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm15844-201ENSMUST00000118016 576 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm13983-201ENSMUST00000118018 865 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm8534-201ENSMUST00000118553 766 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm14792-201ENSMUST00000119725 258 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm14614-201ENSMUST00000119873 384 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21842-201ENSMUST00000177552 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21626-201ENSMUST00000177791 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21562-201ENSMUST00000177888 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21539-201ENSMUST00000177925 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21599-201ENSMUST00000178249 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21914-201ENSMUST00000178452 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21723-201ENSMUST00000178692 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21916-201ENSMUST00000178771 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21801-201ENSMUST00000178865 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21633-201ENSMUST00000178941 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21821-201ENSMUST00000179646 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21588-201ENSMUST00000180074 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21780-201ENSMUST00000180128 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21572-201ENSMUST00000180134 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm21529-201ENSMUST00000180175 498 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm26960-201ENSMUST00000182263 412 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm27004-201ENSMUST00000183300 727 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm27585-201ENSMUST00000183717 199 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm29370-202ENSMUST00000187476 499 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm28665-201ENSMUST00000189269 670 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm28620-201ENSMUST00000190463 439 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm45122-201ENSMUST00000206376 784 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm45722-201ENSMUST00000213075 466 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm6988-201ENSMUST00000222676 375 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm6575-201ENSMUST00000222946 697 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm7768-201ENSMUST00000222988 597 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hoxd3P09027 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Hoxd3P09027 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.19□□□□□ -1.58
Hoxd3P09027 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms