Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a3E9PWQ3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm8260-201ENSMUST00000119230 353 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm11387-201ENSMUST00000120266 772 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm11403-201ENSMUST00000122195 369 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm18602-201ENSMUST00000209794 851 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm22310-201ENSMUST00000157509 116 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm15946-201ENSMUST00000160654 423 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm43155-201ENSMUST00000202661 494 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm3829-201ENSMUST00000222362 619 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.07□□□□□ -1.76
Col6a3E9PWQ3 Gm12039-201ENSMUST00000118219 180 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm12813-201ENSMUST00000119615 902 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm25295-201ENSMUST00000122794 306 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm25369-201ENSMUST00000158848 132 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm9294-201ENSMUST00000165198 789 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm10087-201ENSMUST00000167650 330 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm37057-201ENSMUST00000192624 1916 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm23318-201ENSMUST00000158000 108 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm36998-201ENSMUST00000193205 704 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm14587-201ENSMUST00000121714 658 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm12819-201ENSMUST00000122223 629 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm37492-201ENSMUST00000191948 376 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm37355-201ENSMUST00000193345 606 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Gm18377-201ENSMUST00000215141 607 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC4.06□□□□□ -1.76
Col6a3E9PWQ3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Mir6938-201ENSMUST00000184173 63 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm28967-201ENSMUST00000187351 281 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm19030-201ENSMUST00000194947 552 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gm2189-201ENSMUST00000201419 429 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Col6a3E9PWQ3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms