Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm22778-201ENSMUST00000104090 128 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm24230-201ENSMUST00000104313 129 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm15766-201ENSMUST00000118025 813 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm13501-201ENSMUST00000118477 979 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm7840-201ENSMUST00000122086 533 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm22895-201ENSMUST00000157508 308 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm14527-201ENSMUST00000179300 639 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28574-201ENSMUST00000185757 699 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28781-201ENSMUST00000185760 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28339-201ENSMUST00000185845 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28596-201ENSMUST00000185870 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29062-201ENSMUST00000186032 694 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29574-201ENSMUST00000186226 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28828-201ENSMUST00000186601 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28057-201ENSMUST00000186603 615 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28255-201ENSMUST00000187101 694 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29307-201ENSMUST00000187367 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28397-201ENSMUST00000187970 699 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28896-201ENSMUST00000188609 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29545-201ENSMUST00000188878 694 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm18352-201ENSMUST00000189113 902 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29339-201ENSMUST00000189613 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm28159-201ENSMUST00000190296 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29366-201ENSMUST00000190481 699 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm29407-201ENSMUST00000191468 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm32295-201ENSMUST00000192558 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm37433-201ENSMUST00000192695 678 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm31260-201ENSMUST00000193478 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm37441-201ENSMUST00000194430 678 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm38107-201ENSMUST00000194873 696 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm32308-201ENSMUST00000203053 280 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm44773-201ENSMUST00000207374 557 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm44683-201ENSMUST00000209088 484 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 AC123944.2-201ENSMUST00000215290 382 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm23928-201ENSMUST00000082469 145 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC3.37□□□□□ -1.87
Six6Q9QZ28 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Six6Q9QZ28 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm4736-201ENSMUST00000100870 380 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm23063-201ENSMUST00000102350 93 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm23594-201ENSMUST00000104307 134 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm14605-201ENSMUST00000120599 268 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Mir7058-201ENSMUST00000184637 75 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm9238-201ENSMUST00000196181 329 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 AC120011.1-201ENSMUST00000202147 744 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 AC134439.2-201ENSMUST00000221950 467 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 AC152169.2-201ENSMUST00000224558 613 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 AC122034.1-201ENSMUST00000227641 595 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.36□□□□□ -1.87
Six6Q9QZ28 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Six6Q9QZ28 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.36□□□□□ -1.87
Six6Q9QZ28 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms