Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clp1Q99LI9 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm11409-201ENSMUST00000118621 403 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm9225-201ENSMUST00000121921 836 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm15899-201ENSMUST00000128586 238 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm4487-201ENSMUST00000150617 442 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm5139-201ENSMUST00000175943 249 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm29596-201ENSMUST00000185710 385 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm29556-201ENSMUST00000187591 696 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm37658-201ENSMUST00000192672 315 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm18488-201ENSMUST00000215082 364 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 CT010455.1-201ENSMUST00000218579 413 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AC116589.3-202ENSMUST00000221770 649 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AC116589.6-201ENSMUST00000222252 649 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 AV026068-231ENSMUST00000225862 482 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clp1Q99LI9 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.31□□□□□ -1.4
Clp1Q99LI9 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm14670-201ENSMUST00000117327 337 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm14142-201ENSMUST00000117833 296 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm13866-201ENSMUST00000118901 968 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm14591-201ENSMUST00000120407 518 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm15044-201ENSMUST00000120703 598 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm15014-201ENSMUST00000120742 258 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm12322-201ENSMUST00000121605 389 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm25909-201ENSMUST00000157619 121 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm24853-201ENSMUST00000158026 121 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm23024-201ENSMUST00000158770 292 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Mir3062-201ENSMUST00000174986 105 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm8221-201ENSMUST00000178052 564 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm26335-201ENSMUST00000178449 107 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm20773-201ENSMUST00000178940 681 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm8649-201ENSMUST00000181799 233 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Mir7687-201ENSMUST00000184722 59 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms