Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm27254-201ENSMUST00000183926 517 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm28625-201ENSMUST00000188309 205 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm5252-201ENSMUST00000189030 909 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm18382-201ENSMUST00000194394 582 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm43037-201ENSMUST00000196808 250 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm21006-201ENSMUST00000196930 667 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Mir6994-201ENSMUST00000198985 73 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm8264-201ENSMUST00000217801 465 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm8158-201ENSMUST00000219220 465 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm8112-201ENSMUST00000219637 465 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm5457-201ENSMUST00000022260 333 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.23□□□□□ -1.73
Lsm1Q8VC85 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lsm1Q8VC85 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm14875-201ENSMUST00000120881 319 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm43856-201ENSMUST00000197004 369 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm39197-201ENSMUST00000212069 457 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm2607-201ENSMUST00000212389 627 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Supt4b-201ENSMUST00000214434 351 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Synpr-207ENSMUST00000223583 3362 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.22□□□□□ -1.73
Lsm1Q8VC85 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.21□□□□□ -1.73
Lsm1Q8VC85 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
Lsm1Q8VC85 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm24160-201ENSMUST00000104594 126 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Lipe-203ENSMUST00000105177 1251 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm12638-201ENSMUST00000119531 298 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm13118-201ENSMUST00000120402 549 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm5353-201ENSMUST00000139800 793 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm23702-201ENSMUST00000158840 130 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Rab26os-201ENSMUST00000176215 477 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 V1rg10-201ENSMUST00000183378 937 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm21856-201ENSMUST00000187547 696 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm28639-201ENSMUST00000191519 481 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm43774-201ENSMUST00000196327 878 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm42566-201ENSMUST00000197120 643 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm43524-201ENSMUST00000197278 298 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm45006-201ENSMUST00000206078 690 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm44603-201ENSMUST00000206820 367 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm18877-201ENSMUST00000207706 539 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm23456-201ENSMUST00000083335 137 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lsm1Q8VC85 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms