Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm6806-201ENSMUST00000120092 1006 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm23385-201ENSMUST00000158592 295 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm18522-201ENSMUST00000173947 650 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 AC109214.2-201ENSMUST00000220089 358 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc9Q8VC31 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm22592-201ENSMUST00000104242 131 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm8061-201ENSMUST00000122380 350 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm26254-201ENSMUST00000122491 118 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm25430-201ENSMUST00000157614 289 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm3008-201ENSMUST00000160566 571 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm26914-201ENSMUST00000182262 223 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28353-201ENSMUST00000186482 570 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28533-201ENSMUST00000186741 570 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm9722-201ENSMUST00000194568 802 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm8458-201ENSMUST00000196658 819 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm43215-201ENSMUST00000199108 252 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm43992-201ENSMUST00000204358 197 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm44673-201ENSMUST00000205692 996 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm7587-201ENSMUST00000207618 1021 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm44688-201ENSMUST00000209083 537 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm45249-201ENSMUST00000211021 348 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm9202-201ENSMUST00000223036 437 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 AC159242.1-201ENSMUST00000225832 194 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 CT009711.3-201ENSMUST00000225882 250 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 AC121542.1-201ENSMUST00000227245 721 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.66□□□□□ -1.5
Ccdc9Q8VC31 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm26387-201ENSMUST00000104238 132 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm13451-201ENSMUST00000117649 592 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm12007-201ENSMUST00000120978 597 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm16363-201ENSMUST00000132460 877 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm23116-201ENSMUST00000158481 67 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm23773-201ENSMUST00000158985 296 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm16545-201ENSMUST00000161968 463 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm18358-201ENSMUST00000173179 1277 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm21756-201ENSMUST00000178380 930 ntBASIC5.65□□□□□ -1.5
Ccdc9Q8VC31 Gm21405-201ENSMUST00000179024 930 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms