Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm21638-201ENSMUST00000179473 836 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm44681-201ENSMUST00000208447 842 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm29774-201ENSMUST00000219270 436 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm43209-201ENSMUST00000198949 1588 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm12173-201ENSMUST00000117622 273 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm14369-201ENSMUST00000121355 285 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm22380-201ENSMUST00000157479 95 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm18403-201ENSMUST00000192907 529 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm36943-201ENSMUST00000194422 282 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm43093-201ENSMUST00000202439 1213 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Gm10704-201ENSMUST00000098952 730 ntBASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a6Q8C6K9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm15018-201ENSMUST00000117090 633 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm4134-201ENSMUST00000173244 563 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 AC159193.1-201ENSMUST00000222872 2517 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm14365-201ENSMUST00000117535 587 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm14299-201ENSMUST00000117586 397 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm24477-201ENSMUST00000157438 103 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm25667-201ENSMUST00000157701 275 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm18350-201ENSMUST00000187395 955 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm43304-201ENSMUST00000196803 326 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm43856-201ENSMUST00000197004 369 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm18011-201ENSMUST00000203717 565 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.73□□□□□ -1.81
Col6a6Q8C6K9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col6a6Q8C6K9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms