Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm13430-201ENSMUST00000121366 288 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm12893-201ENSMUST00000121732 275 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm23118-201ENSMUST00000122657 187 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm14364-201ENSMUST00000129209 267 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm22563-201ENSMUST00000157333 269 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm22381-201ENSMUST00000158186 107 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm25433-201ENSMUST00000158283 286 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Mir7037-201ENSMUST00000184414 65 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm18698-201ENSMUST00000192327 668 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm37838-201ENSMUST00000194464 312 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm44322-201ENSMUST00000196830 115 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm44382-201ENSMUST00000198683 122 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm4017-201ENSMUST00000084813 338 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim47Q8C0E3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Mir700-201ENSMUST00000102169 79 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm8289-201ENSMUST00000144814 1182 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm25246-201ENSMUST00000175476 69 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm29196-201ENSMUST00000189239 618 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Npn2-202ENSMUST00000189275 235 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm2053-201ENSMUST00000195671 631 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm43723-201ENSMUST00000196886 189 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm42672-201ENSMUST00000197821 352 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm5318-201ENSMUST00000205249 406 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm5176-202ENSMUST00000220267 583 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Olfr467-201ENSMUST00000084756 927 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim47Q8C0E3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms