Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Usp40Q8BWR4 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm22657-201ENSMUST00000104197 132 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm22676-201ENSMUST00000116972 129 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm15110-201ENSMUST00000117545 881 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm12717-201ENSMUST00000118427 983 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm13172-201ENSMUST00000118685 256 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm13690-201ENSMUST00000118989 285 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm11606-201ENSMUST00000120706 617 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm15116-201ENSMUST00000122248 663 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm25665-201ENSMUST00000157695 110 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Mir1947-201ENSMUST00000158235 85 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm26404-201ENSMUST00000158498 109 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm26652-202ENSMUST00000181672 475 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm6051-201ENSMUST00000201529 352 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm18410-201ENSMUST00000207199 577 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm6230-201ENSMUST00000208077 780 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm34783-201ENSMUST00000209159 303 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm19096-201ENSMUST00000209705 766 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm45269-201ENSMUST00000210359 282 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm19709-201ENSMUST00000215403 482 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm24166-201ENSMUST00000082724 135 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Gm44250-201ENSMUST00000203092 4229 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Usp40Q8BWR4 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm23608-201ENSMUST00000104545 128 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm13867-201ENSMUST00000120844 395 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm28802-201ENSMUST00000188624 944 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm43007-201ENSMUST00000197618 291 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm43171-201ENSMUST00000199882 291 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm29817-201ENSMUST00000210098 172 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm45608-201ENSMUST00000210948 389 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm20946-201ENSMUST00000212367 461 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 AC116726.2-201ENSMUST00000217629 986 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 AC131720.3-201ENSMUST00000219113 275 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm7045-201ENSMUST00000221466 605 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm37661-201ENSMUST00000191863 1550 ntBASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms