Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Usp49Q6P9L4 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Usp49Q6P9L4 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm12889-201ENSMUST00000118684 241 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm25318-201ENSMUST00000122554 314 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm24628-201ENSMUST00000122761 289 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm22940-201ENSMUST00000158560 155 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Mir6344-201ENSMUST00000183462 104 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm42720-201ENSMUST00000196813 300 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm5284-201ENSMUST00000199053 903 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm29781-201ENSMUST00000203862 478 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm19253-201ENSMUST00000204279 307 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm43919-201ENSMUST00000204303 364 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 AC192616.1-201ENSMUST00000221922 132 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp49Q6P9L4 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm26377-201ENSMUST00000102184 108 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm8129-201ENSMUST00000118230 213 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm15141-201ENSMUST00000121860 729 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm15885-201ENSMUST00000122114 388 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm25048-201ENSMUST00000158598 91 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm22693-201ENSMUST00000175049 442 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp49Q6P9L4 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.29□□□□□ -1.56
Usp49Q6P9L4 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.29□□□□□ -1.56
Usp49Q6P9L4 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms