Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm25376-201ENSMUST00000104340 133 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm8296-201ENSMUST00000185597 524 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm43649-201ENSMUST00000196596 391 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44294-201ENSMUST00000205090 728 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm24376-201ENSMUST00000104399 127 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm11398-201ENSMUST00000120330 320 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm12103-201ENSMUST00000121892 362 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm22514-201ENSMUST00000122547 308 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm25908-201ENSMUST00000157624 98 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm4410-201ENSMUST00000199349 686 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44023-201ENSMUST00000203710 469 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm23226-201ENSMUST00000116927 103 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm14621-201ENSMUST00000117709 689 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm4487-201ENSMUST00000150617 442 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Mir6996-201ENSMUST00000183922 61 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm43730-201ENSMUST00000199863 372 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm8820-201ENSMUST00000204077 571 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm13386-201ENSMUST00000117677 124 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm23098-201ENSMUST00000157552 299 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm24520-201ENSMUST00000179510 110 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm24949-201ENSMUST00000183609 215 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Mir6345-201ENSMUST00000184286 128 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm29484-201ENSMUST00000186067 324 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm7946-201ENSMUST00000203326 958 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44879-201ENSMUST00000207007 503 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm18320-201ENSMUST00000211304 595 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm18120-201ENSMUST00000220079 511 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.92□□□□□ -1.62
Ccdc88aQ5SNZ0 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88aQ5SNZ0 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms